[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 69 items for (author: huang & rh)

EMDB-42820:
SARS-CoV-2 5' proximal stem-loop 5 and 6 with SL5b extended
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42816:
SARS-CoV-1 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyp:
SARS-CoV-1 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42801:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42802:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42805:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42808:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 4
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42809:
MERS 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42810:
MERS 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42811:
MERS 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42818:
SARS-CoV-2 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42819:
SARS-CoV-2 5' proximal stem-loop 5 and 6 with SL5c extended
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42821:
SARS-CoV-2 5' proximal stem-loop 5 and 6
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uye:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyg:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyj:
BtCoV-HKU5 5' proximal stem-loop 5, conformation 4
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyk:
MERS 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uyl:
MERS 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uym:
MERS 5' proximal stem-loop 5, conformation 3
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

PDB-8uys:
SARS-CoV-2 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42803:
HCoV-229E 5' proximal stem-loop 5
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42813:
HCoV-NL63 5' proximal stem-loop 5, conformation 1
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-42814:
HCoV-NL63 5' proximal stem-loop 5, conformation 2
Method: single particle / : Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R

EMDB-29301:
Neurotensin receptor allosterism revealed in complex with a biased allosteric modulator
Method: single particle / : Krumm BE, Diberto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-29302:
CryoEM structure of Go-coupled NTSR1 with a biased allosteric modulator
Method: single particle / : Krumm BE, DiBerto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-29303:
CryoEM structure of Go-coupled NTSR1
Method: single particle / : Krumm BE, DiBerto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-26767:
The 2.19-angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - Complex minus stalk
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

EMDB-26801:
The 1.67 Angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L)
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

EMDB-26802:
The CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - Full complex focused refinement of stalk
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

EMDB-27661:
The 1.52 angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L)
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

PDB-7utd:
The 2.19-angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - Complex minus stalk
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

PDB-7uur:
The 1.67 Angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L)
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

PDB-7uus:
The CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - Full complex focused refinement of stalk
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

PDB-8dqv:
The 1.52 angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L)
Method: single particle / : Grinter R, Venugopal H, Kropp A, Greening C

EMDB-27966:
CryoEM structure of miniGq-coupled hM3Dq in complex with DCZ
Method: single particle / : Zhang S, Fay JF, Roth BL

EMDB-27967:
CryoEM structure of miniGo-coupled hM4Di in complex with DCZ
Method: single particle / : Zhang S, Fay JF, Roth BL

EMDB-27968:
CryoEM structure of miniGq-coupled hM3Dq in complex with CNO
Method: single particle / : Zhang S, Fay JF, Roth BL

EMDB-27969:
CryoEM structure of miniGq-coupled hM3R in complex with Iperoxo
Method: single particle / : Zhang S, Fay JF, Roth BL

EMDB-27970:
CryoEM structure of miniGq-coupled hM3R in complex with iperoxo (local refinement)
Method: single particle / : Zhang S, Fay JF, Roth BL

EMDB-27779:
Structure of the SARS-CoV-2 spike glycoprotein S2 subunit
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8dya:
Structure of the SARS-CoV-2 spike glycoprotein S2 subunit
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-27752:
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-27753:
CryoEM structure of Gq-coupled MRGPRX1 with peptide ligand BAM8-22 and positive allosteric modulator ML382
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-27754:
CryoEM structure of Gq-coupled MRGPRX1 with ligand Compound-16
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-24944:
Damaged 70S ribosome with PrfH bound
Method: single particle / : Tian Y, Zeng F, Raybarman A, Carruthers A, Li Q, Fatma S, Huang RH

EMDB-24945:
Intact 70S ribosome without PrfH bound
Method: single particle / : Tian Y, Zeng F, Raybarman A, Carruthers A, Li Q, Fatma S, Huang RH

EMDB-30947:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30948:
Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30949:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-31249:
S protein of SARS-CoV-2 in complex with GW01
Method: single particle / : Shen YP, Zhang YY, Yan RH, Li YN, Zhou Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more